ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0443845
Analysis Project Name Variovorax sp. 679
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 237656
Completion Status Complete
IMG Completion Date 2020-08-17
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.11
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 48
Contig Count 48
Gene Calling Method (MIGS-32)
Gene Count 6890
Estimated Size 7212419
Sequencing Depth (MIGS-31.1) 200.0x
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.19
Added By JGI automated process on 2020-07-09
Last Modified By JGI automated process on 2020-08-31
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2885198086
Genbank Accession
Genbank ID RXFS00000000 (GCA_003952185.1)
Release Date 2020-03-04
NCBI Genbank Version RXFS01
Genbank Release Date 2020-03-04
ANALYSIS PROJECT COMPOSITION
Study Caulobacter flavus CGMCC1 15093 genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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