ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0442698
Analysis Project Name Shimia sp. WX04
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 240176
Completion Status Complete
IMG Completion Date 2020-09-21
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Velvet v. 2.8
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 12
Contig Count 12
Gene Calling Method (MIGS-32)
Gene Count 3795
Estimated Size 3781481
Sequencing Depth (MIGS-31.1) 220.0x
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.19
Added By JGI automated process on 2020-07-07
Last Modified By JGI automated process on 2020-10-13
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2891545435
Genbank Accession
Genbank ID VCDK00000000 (GCA_007995215.1)
Release Date 2019-08-16
NCBI Genbank Version VCDK01
Genbank Release Date 2019-08-16
ANALYSIS PROJECT COMPOSITION
Study Shimia sp. WX04 genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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