ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0440763
Analysis Project Name Prevotella mizrahii LKV-178-WT-2A
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 259848
Completion Status Complete
IMG Completion Date 2022-01-13
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. V3.6.1
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 108
Contig Count 108
Gene Calling Method (MIGS-32)
Gene Count 3349
Estimated Size 3920788
Sequencing Depth (MIGS-31.1) 400x
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.1.1
Added By JGI automated process on 2020-07-04
Last Modified By JGI automated process on 2022-01-21
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2937440672
Genbank Accession
Genbank ID VUNG00000000 (GCA_009695775.1)
Release Date 2019-11-24
NCBI Genbank Version VUNG01
Genbank Release Date 2019-11-24
ANALYSIS PROJECT COMPOSITION
Study Pig intestinal bacterial collection (PIBAC)
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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