ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0440236
Analysis Project Name Prefix Actinobacteria bacterium SCGC AG-212-D09
Analysis Project Name Suffix
Analysis Project Type Single Cell Analysis (unscreened)
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.0.0
IMG Decontamination No
IMG Decontamination Method
Number of tRNAs
tRNA Software
Completeness Strategy
Scaffold Count
Contig Count 69
Gene Calling Method (MIGS-32)
Gene Count 725
Estimated Size 709610
Sequencing Depth (MIGS-31.1) 1000.0x
Annotation Pipeline
Added By JGI automated process on 2020-07-04
Last Modified By
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
Genbank Accession
Genbank ID LSSY00000000 (GCA_001644325.1)
Release Date 2016-05-16
NCBI Genbank Version LSSY01
Genbank Release Date 2016-05-16
ANALYSIS PROJECT COMPOSITION
Study single cell sequences from one soil sample
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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