ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0439196
Analysis Project Name Prefix Lab-enriched soil microbial communities from a contaminated agricultural site, Guadeloupe, France - GammaHCH
Analysis Project Name Suffix MSP
Analysis Project Type Metagenome Analysis
IMG Submission ID 234862
Completion Status Complete
IMG Completion Date 2020-07-30
PI Elizabeth A. Edwards
Analysis Project Description Metaspades assembly o fGammaHCH
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.12.0
Scaffold Count 1045731
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1333079
Estimated Size 574130157
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.18
Added By Camilla Nesbø on 2020-06-04
Last Modified By JGI automated process on 2021-09-16
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300040736
Metagenome bin count 23
Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Metagenomes of anaerobic enrichment cultures that dechlorinate hexachlorocyclohexane isomers
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects (DAP) 0

 

 

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