Studies
|
49,851 |
|
Biosamples
|
147,138 |
|
Sequencing Projects
|
435,837 |
|
Analysis Projects
|
327,477 |
| Organisms | 418,436 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0435267 |
| Analysis Project Name Prefix |
FICUS49499 Metagenome Norway combined assembly |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Combined Assembly |
|
IMG Submission ID
|
227882 |
| Completion Status |
Complete |
|
IMG Completion Date
|
2020-03-07 |
| PI | Petr Baldrian |
|
Analysis Project Description
|
|
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
MEGAHIT v. 1.1.2 |
|
IMG Decontamination
|
|
|
IMG Decontamination Method
|
|
|
Scaffold Count
|
9127056 |
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
13838915 |
| Estimated Size |
7985504860 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Annotation Pipeline |
IMG Annotation Pipeline v.5.0.12 |
| Added By |
JGI automated process
on 2020-02-03 |
| Last Modified By |
JGI automated process
on 2021-10-11 |
|
ORF Comparison Tools
|
|
|
16S Recovered
|
|
|
16S Recovery Software
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
3300037827 |
| IMG Metagenome bin count | 0 |
| IMG Predicted viruses |
|
|
Genbank Accession
|
|
| Genbank Release Date |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Soil, plant litter and rhizosphere microbial communities from European coniferous forests |
|
Number of Studies
|
1 |
|
Number of Biosamples
|
20 |
|
Number of Projects
|
20 |
|
Number of Related Analysis Projects
|
20 |
|
Derived Analysis Projects (DAP)
|
0 |
| JGI INFORMATION | |
|
ITS Analysis Project ID
|
1272937 (Portal) |
|
ITS Analysis Project Name
|
FICUS49499 Metagenome Norway combined assembly |
|
ITS Analysis Product Name
|
Combined Assembly |
| ITS Version Number |
2 |
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