ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0396051
Analysis Project Name Prefix Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1770 RNA GHGhigh gp2
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome mapping (self)
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI Graeme Attwood
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count
Contig Count
Gene Calling Method (MIGS-32)
Gene Count
Estimated Size
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By JGI automated process on 2019-08-16
Last Modified By JGI automated process on 2019-08-28
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG RNA-Seq ID
Genbank
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Rumen microbial communities from sheep, dairy cows and beef cattle from various locations
Number of Projects 1
Reference Analysis Project Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1770 RNA GHGhigh gp2 (Metagenome Metatranscriptome)
JGI INFORMATION
ITS Analysis Project ID 1257516 (Portal)
ITS Analysis Project Name 1770 RNA GHGhigh gp2 Expression - Self NovaSeq
ITS Analysis Product Name Metagenome Metatranscriptome Expression - Self
ITS NCBI Taxon ID
ITS Version Number

 

 

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