ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0395524
Analysis Project Name Prefix Sub-Antarctic metatranscriptomes combined assembly
Analysis Project Name Suffix
Analysis Project Type Combined Assembly
IMG Submission ID 222258
Completion Status Complete
IMG Completion Date 2020-03-19
PI Steven Wilhelm
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. MEGAHIT v1.1.2
IMG Decontamination
IMG Decontamination Method
Scaffold Count 3615796
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 4828461
Estimated Size 3555481851
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.13
Added By JGI automated process on 2019-08-06
Last Modified By JGI automated process on 2020-03-19
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300037891
Genbank Accession
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Seawater microbial communities from the Antarctic Ocean
Number of Studies 1
Number of Biosamples 17
Number of Projects 17
Number of Related Analysis Projects 17
Derived Analysis Projects (DAP) 1
JGI INFORMATION
ITS Analysis Project ID 1256543 (Portal)
ITS Analysis Project Name Sub-Antarctic metatranscriptomes combined assembly
ITS Analysis Product Name Co-Assembly - Metagenome Metatranscriptome
ITS Version Number 1

 

 

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