ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0394407
Analysis Project Name Prefix Bradyrhizobium sp. CIR1
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 221170
Completion Status Complete
IMG Completion Date 2019-11-12
PI William Whitman
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.13.0
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 75
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 8245
Estimated Size 8652217
Sequencing Depth (MIGS-31.1) 173x
Annotation Pipeline IMG Annotation Pipeline v.5.0.3
Added By JGI automated process on 2019-07-06
Last Modified By JGI automated process on 2020-02-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2841957949
IMG RNA-Seq ID
Genbank Accession
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genomic Encyclopedia of Type Strains, Phase IV (KMG-V): Genome sequencing to study the core and pangenomes of soil and plant-associated prokaryotes
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1253027 (Portal)
ITS Analysis Project Name Bradyrhizobium sp. CIR1
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number

 

 

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