ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0392519
Analysis Project Name Prefix Spirobacillus cienkowskii binning01
Analysis Project Name Suffix
Analysis Project Type Metagenome-Assembled Genome
IMG Submission ID 212663
NCBI BioProject ID 450308
NCBI BioProject Accession PRJNA450308
NCBI BioSample Accession SAMN08934851
Completion Status Complete
IMG Completion Date 2019-06-24
PI Jorge L. Rodrigues
Description Submitting a public MAG from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
GOLD Organism Name Spirobacillus cienkowskii binning01
NCBI Taxonomy ID 495820
Phylum PROTEOBACTERIA-OLIGOFLEXIA
Phylogeny Suggestion
Domain BACTERIAL
NCBI Superkingdom Bacteria
NCBI Kingdom
Assembly Method (MIGS-30)
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 126
Contig Count
Binning Method MaxBin v.2.0
Gene Calling Method (MIGS-32)
Gene Count 2525
Estimated Size 2739001
Sequencing Depth (MIGS-31.1)
Contamination Percentage
Completeness Percentage
Annotation Pipeline IMG Annotation Pipeline v.5.0.2
Added By Supratim Mukherjee on 2019-05-29
Last Modified By JGI automated process on 2019-07-01
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2828505942
IMG RNA-Seq ID
Genbank
Genbank ID QOVW00000000 (GCA_003339605.1)
Assembly Accession GCA_003339605.1
Genbank Release Date
SRA Runs
MAG Publication Species, Reconstructed from Hemolymph Metagenomic Reads.
ANALYSIS PROJECT COMPOSITION
Study Freshwater Daphnia associated microbial communities from lake in Southwestern Michigan, USA
Source Analysis Project Daphnia dentifera associated microbial communities from freshwater lake in Southwestern Michigan, USA - spiro01
Derived Analysis Projects 0

 

 

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