Studies
|
40,442 |
|
Biosamples
|
81,883 |
|
Sequencing Projects
|
315,421 |
|
Analysis Projects
|
249,982 |
| Organisms | 370,280 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0376103 |
| Analysis Project Name Prefix |
Thiobacillaceae bacterium B_16 |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Metagenome-Assembled Genome |
|
IMG Submission ID
|
210660 |
|
NCBI BioProject ID
|
|
|
NCBI BioProject Accession
|
|
|
NCBI BioSample Accession
|
|
| Completion Status |
Complete |
|
Completion Date
|
2019-05-29 |
| PI | Ianina Altshuler |
|
Description
|
Thiobacillaeceae binned from combined metagenomes from ice-wedge Polygon SIP |
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
| GOLD Organism Name |
Thiobacillaceae bacterium B_16 |
|
NCBI Taxonomy ID
|
2008790 |
| Phylum | PROTEOBACTERIA-BETA |
| Phylogeny Suggestion |
|
| Domain |
BACTERIAL |
| NCBI Superkingdom |
Bacteria |
| NCBI Kingdom |
|
|
Assembly Method
(MIGS-30)
|
|
|
IMG Decontamination
|
No |
|
IMG Decontamination Method
|
|
| GenePRIMP |
No |
|
Scaffold Count
|
407 |
|
Contig Count
|
|
|
Binning Method
|
MetaBAT2 v. 2.12.1 |
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
3547 |
| Estimated Size |
3164553 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Annotation Pipeline |
IMG Annotation Pipeline v.5.0.1 |
| Added By |
Ianina Altshuler
on 2019-04-23 |
| Last Modified By |
JGI automated process
on 2019-06-10 |
| Non-SP-Owner AP |
No |
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
2824030564 |
| IMG RNA-Seq ID |
|
|
Genbank
|
|
| Assembly Accession |
|
| SRA Runs |
|
| MAG Publication |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Ice-wedge Polygon SIP Study |
| Source Analysis Project |
Soil microbial communities from ice wedge polygon in Axel Heiberg Island, Nunavut, Canada. Combined Assembly of Gp0402321, Gp0402355, Gp0402358 |
|
Derived Analysis Projects
|
0 |
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