ANALYSIS PROJECT INFORMATION | |
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GOLD Analysis Project ID
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Ga0376103 |
Analysis Project Name Prefix |
Thiobacillaceae bacterium B_16 |
Analysis Project Name Suffix
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Analysis Project Type
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Metagenome-Assembled Genome |
IMG Submission ID
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210660 |
NCBI BioProject ID
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NCBI BioProject Accession
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NCBI BioSample Accession
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Completion Status |
Complete |
IMG Completion Date
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2019-05-29 |
PI | Ianina Altshuler |
Description
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Thiobacillaeceae binned from combined metagenomes from ice-wedge Polygon SIP |
Visibility | Public |
ANALYSIS PROJECT METADATA | |
GOLD Organism Name |
Thiobacillaceae bacterium B_16 |
NCBI Taxonomy ID
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2008790 |
Phylum | PROTEOBACTERIA-BETA |
Phylogeny Suggestion |
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Domain |
BACTERIAL |
NCBI Superkingdom |
Bacteria |
NCBI Kingdom |
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Assembly Method
(MIGS-30)
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IMG Decontamination
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No |
IMG Decontamination Method
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GenePRIMP |
No |
Scaffold Count
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407 |
Contig Count
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Binning Method
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MetaBAT2 v. 2.12.1 |
Gene Calling Method
(MIGS-32)
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Gene Count |
3547 |
Estimated Size |
3164553 |
Sequencing Depth
(MIGS-31.1)
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Contamination Percentage |
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Completeness Percentage |
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Annotation Pipeline |
IMG Annotation Pipeline v.5.0.1 |
Added By |
Ianina Altshuler
on 2019-04-23 |
Last Modified By |
JGI automated process
on 2019-06-10 |
Non-SP-Owner AP |
No |
PROJECT EXTERNAL REFERENCES | |
IMG Taxon ID
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2824030564 |
IMG RNA-Seq ID |
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Genbank
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Assembly Accession |
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Genbank Release Date |
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SRA Runs |
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MAG Publication |
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ANALYSIS PROJECT COMPOSITION | |
Study |
Ice-wedge Polygon SIP Study |
Source Analysis Project |
Soil microbial communities from ice wedge polygon in Axel Heiberg Island, Nunavut, Canada. Combined Assembly of Gp0402321, Gp0402355, Gp0402358 |
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0 |
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