ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0376057
Analysis Project Name Prefix Metatranscriptome of methane-enriched sediment microbial communities from Lake Washington, WA, United States - HO-FL-1
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 215457
Completion Status Complete
IMG Completion Date 2019-11-19
PI Ludmila Chistoserdova
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. MEGAHIT v1.1.2
Scaffold Count 77397
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 116072
Estimated Size 95446296
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.3
Added By JGI automated process on 2019-04-22
Last Modified By JGI automated process on 2019-07-23
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300035615
IMG RNA-Seq ID
Genbank Accession
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Sediment microbial communities from Lake Washington near Medina, WA, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1241801 (Portal)
ITS Analysis Project Name HO-FL-1 Annotation
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number

 

 

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