ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0376057
Analysis Project Name Prefix Metatranscriptome of methane-enriched sediment microbial communities from Lake Washington, WA, United States - HO-FL-1
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 215457
Completion Status Complete
IMG Completion Date 2019-07-23
PI Ludmila Chistoserdova
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. MEGAHIT v1.1.2
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 77397
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 116072
Estimated Size 95446296
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.3
Added By JGI automated process on 2019-04-22
Last Modified By JGI automated process on 2019-07-23
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300035615
IMG RNA-Seq ID
Genbank
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Sediment microbial communities from Lake Washington near Medina, WA, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects 1
JGI INFORMATION
ITS Analysis Project ID 1241801 (Portal)
ITS Analysis Project Name HO-FL-1 Annotation
ITS Analysis Product Name Metagenome Metatranscriptome
ITS NCBI Taxon ID
ITS Version Number

 

 

  You are going to add the following user to your analysis project, project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your analysis project, project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the AP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Changing the AP visibility will also change downgrade visibility on the following items:

 

Do you want to continue with this visibility change?