ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0375827
Analysis Project Name Prefix Polaromonas sp. PH2015_03U_58_17
Analysis Project Name Suffix
Analysis Project Type Metagenome-Assembled Genome
IMG Submission ID
NCBI BioProject ID
NCBI BioProject Accession PRJNA448579
NCBI BioSample Accession SAMN10167042
Completion Status Incomplete
IMG Completion Date
PI Jill Banfield
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
GOLD Organism Name Polaromonas sp. PH2015_03U_58_17
NCBI Taxonomy ID 1869339
Phylum PROTEOBACTERIA-BETA
Domain BACTERIAL
NCBI Superkingdom Bacteria
NCBI Kingdom
Number of tRNAs
tRNA Software
Completeness Strategy
Scaffold Count
Contig Count
Binning Method manually using coverage, GC content, single copy genes, and taxonomic profile with ggKbase
Binning Parameters
Reassembly Attempted
MAG Coverage Software
Gene Calling Method (MIGS-32)
Gene Count
Estimated Size
Sequencing Depth (MIGS-31.1)
Contamination Percentage
Completeness Percentage
Annotation Pipeline
Added By JGI automated process on 2019-04-19
Last Modified By Supratim Mukherjee on 2019-04-22
Non-SP-Owner AP No
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
Genbank Accession
Genbank ID RDZZ00000000 (GCA_004293655.1)
NCBI Genbank Version RDZZ01
Assembly Accession GCA_004293655.1
Genbank Release Date
SRA Runs
MAG Publication
ANALYSIS PROJECT COMPOSITION
Study Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling
Source Analysis Project Placeholder Project to act as source MetG for MAGs

 

 

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