ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0370535
Analysis Project Name Prefix Rock surface microbial communities from Grand Staircase Escalante National Monument, Utah, United States - 20181204_57
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 212872
Completion Status Complete
Completion Date 2019-06-12
PI Nicole Pietrasiak
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) metaspades v. 3.13.0
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 9127
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 70695
Estimated Size 65679130
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.3
Added By JGI automated process on 2019-02-07
Last Modified By JGI automated process on 2019-06-13
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300035017
IMG RNA-Seq ID
Genbank
Assembly Accession
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Terrestrial microbial communities from various environments and locations
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1237743 (Portal)
ITS Analysis Project Name 20181204_57
ITS Analysis Product Name Metagenome Minimal Draft
ITS NCBI Taxon ID
ITS Version Number

 

 

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