ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0349686
Analysis Project Name Prefix Escherichia coli sv. O6:K2:H1 CFT073
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.10.1
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count
Contig Count 1
Gene Calling Method (MIGS-32)
Gene Count 4889
Estimated Size 4720000
Sequencing Depth (MIGS-31.1) 30X
Annotation Pipeline
Added By JGI automated process on 2019-01-09
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG RNA-Seq ID
Genbank
Genbank ID CP028309 (GCA_003028795.1)
Release Date 2018-04-04
NCBI Genbank Version CP028309.1
Assembly Accession GCA_003028795.1
Genbank Release Date 2018-04-04
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Next Generation Sequencing to identify antibiotic resistant genes among clinical isolates of UTI candidates from Lahore, Pakistan.
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

  You are going to add the following user to your analysis project, project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your analysis project, project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the AP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Changing the AP visibility will also change downgrade visibility on the following items:

 

Do you want to continue with this visibility change?