ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0341096
Analysis Project Name Prefix Pasteurella multocida 657BPM
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 243171
Completion Status Complete
IMG Completion Date 2020-11-16
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.5.0
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 41
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 2232
Estimated Size 2286479
Sequencing Depth (MIGS-31.1) 23.53x
Annotation Pipeline IMG Annotation Pipeline v.5.0.20
Added By JGI automated process on 2019-01-03
Last Modified By JGI automated process on 2020-12-01
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2902559737
IMG Metagenome bin count
IMG Predicted viruses
Genbank Accession
Genbank ID LQGP00000000 (GCA_001931185.1)
Release Date 2017-04-06
NCBI Genbank Version LQGP01
Genbank Release Date 2017-04-06
ANALYSIS PROJECT COMPOSITION
Study Bovine respiratory disease (BRD) relevant bacteria
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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