Studies
|
54,052 |
|
Biosamples
|
174,371 |
|
Sequencing Projects
|
485,198 |
|
Analysis Projects
|
368,872 |
| Organisms | 468,053 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0326561 |
| Analysis Project Name |
Methanosaeta sp. BinDmb129 |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Metagenome-Assembled Genome |
|
IMG Submission ID
|
203646 |
|
NCBI BioProject Accession
|
|
|
NCBI BioSample Accession
|
|
| Completion Status |
Complete |
|
IMG Completion Date
|
2018-12-05 |
| PI | Elizabeth A. Edwards |
|
Analysis Project Description
|
Methanosaeta metagenome assembled genome from the anaerobic digester Daisy |
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
| GOLD Organism Name |
Methanosaeta sp. BinDmb129 |
|
NCBI Taxonomy ID
|
2222 |
| Phylum | EURYARCHAEOTA-METHANOMICROBIA |
| Phylogeny Suggestion |
Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia; Methanosarcinales; Methanosaetaceae |
|
Genus
|
Methanosaeta |
| Species |
Methanosaeta sp. BinDmb129 |
| Strain |
BinDmb129 |
| Domain |
ARCHAEAL |
| NCBI Superkingdom |
Archaea |
| NCBI Kingdom |
|
|
Number of tRNAs
|
|
|
tRNA Software
|
|
|
Completeness Strategy
|
|
|
Scaffold Count
|
168 |
|
Contig Count
|
|
|
Binning Method
|
metabat v2.12 |
|
Binning Parameters
|
|
|
Reassembly Attempted
|
|
|
MAG Coverage Software
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
2144 |
| Estimated Size |
1934304 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Contamination Percentage |
|
| Completeness Percentage |
|
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
IMG Annotation Pipeline v.4.16.5 |
| Added By |
Camilla Nesbø
on 2018-11-21 |
| Last Modified By |
JGI automated process
on 2018-12-24 |
|
ORF Comparison Tools
|
|
|
16S Recovered
|
|
|
16S Recovery Software
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
2811994889 |
|
Genbank Accession
|
|
| Genbank Release Date |
|
| Genome Publication |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Metagenomes from anaerobic digester of solid waste |
| Source Analysis Project |
Combined Assembly of Gp0238878, Gp0238879, Gp0242100, Gp0242119 |
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