ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0307836
Analysis Project Name Prefix Acidimicrobium sp. Baikal-G1
Analysis Project Name Suffix
Analysis Project Type Metagenome-Assembled Genome
IMG Submission ID 194023
NCBI BioProject ID
NCBI BioProject Accession
NCBI BioSample Accession SAMN07460802
Completion Status Complete
IMG Completion Date 2018-08-06
PI Francisco Rodriguez-Valera
Analysis Project Description Submitting a public MAG from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
GOLD Organism Name Acidimicrobium sp. Baikal-G1
NCBI Taxonomy ID 1872112
Phylum ACTINOBACTERIA
Phylogeny Suggestion
Genus Acidimicrobium
Species Acidimicrobium sp. Baikal-G1
Strain Baikal-G1
Domain BACTERIAL
NCBI Superkingdom Bacteria
NCBI Kingdom
Number of tRNAs
tRNA Software
Completeness Strategy
Scaffold Count 46
Contig Count
Binning Method Combination of taxonomy, principal-component analysis of tetranucleotide frequencies, GC content, and coverage values in Lake Baikal metagenomes
Binning Parameters
Reassembly Attempted
MAG Coverage Software
Gene Calling Method (MIGS-32)
Gene Count 1001
Estimated Size 983952
Sequencing Depth (MIGS-31.1)
Contamination Percentage
Completeness Percentage
Annotation Pipeline IMG Annotation Pipeline v.4.16.4
Added By Alejandro Rodriguez Mojica on 2018-07-06
Last Modified By JGI automated process on 2018-08-17
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2788500308
Genbank Accession
Genbank ID NSIC00000000 (GCA_002737635.1)
Genbank Release Date
MAG Publication
ANALYSIS PROJECT COMPOSITION
Study Freshwater lake microbial community from Lake Baikal Russia
Source Analysis Project Combined Assembly of freshwater lake microbial community from Lake Baikal Russia

 

 

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