ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0302329
Analysis Project Name Prefix Candidatus Fluviicola riflensis RIFCSPHIGHO2_02_FULL_43_260
Analysis Project Name Suffix
Analysis Project Type Metagenome-Assembled Genome
IMG Submission ID 190004
NCBI BioProject ID
NCBI BioProject Accession
NCBI BioSample Accession SAMN07374784
Completion Status Complete
IMG Completion Date 2018-06-18
PI Jill Banfield
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
GOLD Organism Name Candidatus Fluviicola riflensis RIFCSPHIGHO2_02_FULL_43_260
NCBI Taxonomy ID 1798018
Phylum BACTEROIDETES
Phylogeny Suggestion
Genus Fluviicola
Species Candidatus Fluviicola riflensis
Strain RIFCSPHIGHO2_02_FULL_43_260
Domain BACTERIAL
NCBI Superkingdom Bacteria
NCBI Kingdom
Number of tRNAs
tRNA Software
Completeness Strategy
Scaffold Count 1
Contig Count
Binning Method Binned using GC content, tetranucleotide signatures, variance of abundance patterns across individual samples and taxonomic affiliation of encoded genes in ggKbase
Binning Parameters
Reassembly Attempted
MAG Coverage Software
Gene Calling Method (MIGS-32)
Gene Count 3961
Estimated Size 4551443
Sequencing Depth (MIGS-31.1)
Contamination Percentage
Completeness Percentage
Annotation Pipeline IMG Annotation Pipeline v.4.16.2
Added By Supratim Mukherjee on 2018-05-20
Last Modified By Hema Katta on 2018-12-01
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2784132036
Genbank Accession
Genbank ID CP022585 (GCA_002243285.1)
Genbank Release Date
MAG Publication
ANALYSIS PROJECT COMPOSITION
Study Soil microbial communities from Rifle, Colorado, USA
Source Analysis Project Soil microbial communities from Rifle, Colorado - Rifle CSP2_plank highO2_0.2

 

 

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