ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0227282
Analysis Project Name Prefix Sunxiuqinia elliptica 114D_o
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 178827
Completion Status Complete
IMG Completion Date 2018-02-21
PI Regina Lamendella
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.10.1
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 20
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 4424
Estimated Size 5351657
Sequencing Depth (MIGS-31.1) 240x
Annotation Pipeline IMG Annotation Pipeline v.4.16.0
Added By JGI automated process on 2017-11-14
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2770939459
Genbank Accession
Genbank ID SNWV00000000
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Freshwater and sediment microbial communities from various areas in North America, analyzing microbe dynamics in response to fracking
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1173685 (Portal)
ITS Analysis Project Name Sunxiuqinia elliptica 114D_o
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS Version Number 1

 

 

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