ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0222361
Analysis Project Name Prefix Brachybacterium sp. AG952
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 176317
Completion Status Complete
IMG Completion Date 2018-01-26
PI Vittorio Venturi
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.10.1
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP Yes
Scaffold Count 13
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3372
Estimated Size 3708640
Sequencing Depth (MIGS-31.1) 233x
Annotation Pipeline IMG Annotation Pipeline v.4.15.2
Added By JGI automated process on 2017-10-19
Last Modified By JGI automated process on 2019-08-28
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2767802490
IMG RNA-Seq ID
Genbank
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of rice bacterial endophytes
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1162664 (Portal)
ITS Analysis Project Name Brachybacterium sp. AG952
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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