ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0172722
Analysis Project Name Prefix Photobacterium angustum GCSL-A10-1
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 169779
Completion Status Complete
IMG Completion Date 2018-03-13
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.0.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 50
Contig Count 70
Gene Calling Method (MIGS-32)
Gene Count 4401
Estimated Size 4755392
Sequencing Depth (MIGS-31.1) 147x
Annotation Pipeline IMG Annotation Pipeline v.4.16.1
Added By JGI automated process on 2017-02-16
Last Modified By JGI automated process on 2018-03-27
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2772190731
IMG RNA-Seq ID
Genbank
Genbank ID JZSU00000000 (GCA_000950025.1)
Release Date 2015-08-20
NCBI Genbank Version JZSU01
Assembly Accession GCA_000950025.1
Genbank Release Date 2015-08-20
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequences of foodborne bacterial pathogens - FDA
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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