ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0136765
Analysis Project Name Prefix Rhodanobacter sp. TND4EH1
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 106578
Completion Status Complete
IMG Completion Date 2016-12-09
PI Sarah Lebeis
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.6.2
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 17
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3458
Estimated Size 3791176
Sequencing Depth (MIGS-31.1) 246x
Annotation Pipeline IMG Annotation Pipeline v.4.14.1
Added By JGI automated process on 2016-08-30
Last Modified By JGI automated process on 2020-03-28
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2708743159
Genbank Accession
Genbank ID PEER00000000 (GCA_002749725.1)
Assembly Accession GCA_002749725.1
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Aquatic microbiome from duckweeds obtained from Rutgers Duckweed Stock Cooperative (RDSC)
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1115906 (Portal)
ITS Analysis Project Name Rhodanobacter sp TND4EH1
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS Version Number 1

 

 

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