ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0128988
Analysis Project Name Prefix Lacinutrix sp. JCM 13825
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 129424
Completion Status Complete
IMG Completion Date 2017-05-11
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Celera Assembler v. 7.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 45
Contig Count 46
Gene Calling Method (MIGS-32)
Gene Count 3423
Estimated Size 3660300
Sequencing Depth (MIGS-31.1) 27.0x
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2016-06-07
Last Modified By JGI automated process on 2016-06-08
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2731957953
IMG Metagenome bin count
IMG Predicted viruses
Genbank Accession
Genbank ID LIQH00000000 (GCA_001418085.1)
Release Date 2016-03-01
NCBI Genbank Version LIQH01
Genbank Release Date 2016-03-01
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Lacinutrix strains for genomic relatedness analysis
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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