ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0128703
Analysis Project Name Prefix Nocardia coubleae NBRC 108252
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 129193
Completion Status Complete
IMG Completion Date 2017-05-11
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) newbler v. 2.6
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 39
Contig Count 40
Gene Calling Method (MIGS-32)
Gene Count 6170
Estimated Size 6618950
Sequencing Depth (MIGS-31.1) 125x
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2016-06-07
Last Modified By JGI automated process on 2016-06-08
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2731957729
IMG RNA-Seq ID
Genbank
Genbank ID BDBD00000000 (GCA_001612805.1)
Release Date 2016-04-01
NCBI Genbank Version BDBD01
Assembly Accession GCA_001612805.1
Genbank Release Date 2016-04-01
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Nocardia genome sequencing - National Institute of Technology and Evaluation, Japan
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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