ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0124815
Analysis Project Name Prefix Rhodanobacter sp. Root179
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 96145
Completion Status Complete
IMG Completion Date 2016-10-04
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) A5 v. 20140604
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 89
Contig Count 89
Gene Calling Method (MIGS-32)
Gene Count 3506
Estimated Size 3905750
Sequencing Depth (MIGS-31.1) 300.0x
Annotation Pipeline IMG Annotation Pipeline v.4.12.0
Added By JGI automated process on 2016-05-20
Last Modified By
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2698536621
Genbank Accession
Genbank ID LMHR00000000 (GCA_001428465.1)
Release Date 2016-01-15
NCBI Genbank Version LMHR01
Genbank Release Date 2016-01-15
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Arabidopsis leaf and root microbiota representing the majority of bacterial species in their natural communities
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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