ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0122479
Analysis Project Name Prefix Sphingopyxis sp. HIX
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 100163
Completion Status Complete
IMG Completion Date 2016-11-04
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.5.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 88
Contig Count 90
Gene Calling Method (MIGS-32)
Gene Count 4597
Estimated Size 4864545
Sequencing Depth (MIGS-31.1) 79.0x
Annotation Pipeline IMG Annotation Pipeline v.4.12.1
Added By JGI automated process on 2016-05-10
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2703718760
Genbank Accession
Genbank ID LNSB00000000 (GCA_001468285.1)
Release Date 2015-12-25
NCBI Genbank Version LNSB01
Assembly Accession GCA_001468285.1
Genbank Release Date 2015-12-25
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of isolates from drinking water distribution system in Cincinnati, Ohio
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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