ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0113413
Analysis Project Name Prefix Acinetobacter baumannii ABOB04_b
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 93893
Completion Status Complete
IMG Completion Date 2016-08-31
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Ray v. 1.7
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 377
Contig Count 500
Gene Calling Method (MIGS-32)
Gene Count 3977
Estimated Size 4008333
Sequencing Depth (MIGS-31.1) 80x
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2016-02-19
Last Modified By JGI automated process on 2017-11-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2693429528
IMG RNA-Seq ID
Genbank
Genbank ID LLIV00000000 (GCA_001416385.1)
Release Date 2015-11-09
NCBI Genbank Version LLIV01
Assembly Accession GCA_001416385.1
Genbank Release Date 2015-11-09
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Whole genome sequencing to track hospital outbreaks of Acinetobacter baumannii
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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