ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0112567
Analysis Project Name Prefix Acinetobacter baumannii ABBL122
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 99109
Completion Status Complete
IMG Completion Date 2016-10-19
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Ray v. 1.7
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 274
Contig Count 354
Gene Calling Method (MIGS-32)
Gene Count 3774
Estimated Size 3898786
Sequencing Depth (MIGS-31.1) 80x
Annotation Pipeline IMG Annotation Pipeline v.4.12.0
Added By JGI automated process on 2016-02-19
Last Modified By JGI automated process on 2017-11-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2700989414
IMG RNA-Seq ID
Genbank
Genbank ID LLHS00000000 (GCA_001415835.1)
Release Date 2015-11-09
NCBI Genbank Version LLHS01
Assembly Accession GCA_001415835.1
Genbank Release Date 2015-11-09
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Whole genome sequencing to track hospital outbreaks of Acinetobacter baumannii
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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