ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0079816
Analysis Project Name Prefix Gemm-3 bacterium JGI 053
Analysis Project Name Suffix
Analysis Project Type Single Cell Analysis (screened)
IMG Submission ID 79340
Completion Status Complete
IMG Completion Date 2016-03-01
PI Jennifer Pett-Ridge
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.6.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 40
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1234
Estimated Size 1375702
Sequencing Depth (MIGS-31.1) 170x
Annotation Pipeline
Added By JGI automated process on 2015-08-24
Last Modified By JGI automated process on 2018-01-05
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2651869887
Genbank Accession
Genbank ID OCMP00000000 (GCA_900230155.1)
Release Date 2017-10-23
NCBI Genbank Version OCMP01
Assembly Accession GCA_900230155.1
Genbank Release Date 2017-10-23
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Avena fatua rhizosphere microbial communities from Hopland, California, USA
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 1
JGI INFORMATION
ITS Analysis Project ID 1075229 (Portal)
ITS Analysis Project Name Gemm-3 bacterium JGI 053 (Microbial Minimal Draft Single Cell Screened Genome)
ITS Analysis Product Name Microbial Minimal Draft Single Cell Screened Genome
ITS Version Number 1

 

 

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