ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0078184
Analysis Project Name Prefix Pseudomonas putida YKD221
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 77849
Completion Status Complete
IMG Completion Date 2016-01-22
PI Rida Ali
Analysis Project Description The genome information is expected to give new insights into key metabolic pathways and bacterial adaptation to degrade chemicals.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) newbler v. 2.6
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 84
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 5410
Estimated Size 5865367
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Rida Ali on 2015-07-14
Last Modified By JGI automated process on 2017-03-10
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2648501718
Genbank Accession
Genbank ID BBNC00000000 (GCA_000787655.1)
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study The NBRC Genome Sequencing Project for Pollutant-degrading bacteria
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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