Studies
|
52,222 |
|
Biosamples
|
170,233 |
|
Sequencing Projects
|
472,659 |
|
Analysis Projects
|
360,451 |
| Organisms | 460,481 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0064117 |
| Analysis Project Name |
Crocosphaera watsonii WH 8501 |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Metagenome-Assembled Genome |
|
IMG Submission ID
|
66217 |
|
NCBI BioProject Accession
|
|
|
NCBI BioSample Accession
|
|
| Completion Status |
Complete |
|
IMG Completion Date
|
2015-07-27 |
| PI | Jonathan Zehr |
|
Analysis Project Description
|
|
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
| GOLD Organism Name |
Crocosphaera watsonii WH 8501 |
|
NCBI Taxonomy ID
|
165597 |
| Phylum | CYANOBACTERIA |
| Phylogeny Suggestion |
|
|
Genus
|
Crocosphaera |
| Species |
Crocosphaera watsonii |
| Strain |
WH 8501 |
| Domain |
BACTERIAL |
| NCBI Superkingdom |
Bacteria |
| NCBI Kingdom |
|
|
Number of tRNAs
|
|
|
tRNA Software
|
|
|
Completeness Strategy
|
|
|
Scaffold Count
|
50 |
|
Contig Count
|
|
|
Binning Method
|
|
|
Binning Parameters
|
|
|
Reassembly Attempted
|
|
|
MAG Coverage Software
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
6836 |
| Estimated Size |
6291599 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Contamination Percentage |
|
| Completeness Percentage |
|
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
|
| Added By |
JGI automated process
on 2015-01-23 |
| Last Modified By |
JGI automated process
on 2022-05-23 |
|
ORF Comparison Tools
|
|
|
16S Recovered
|
|
|
16S Recovery Software
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
2623620439 |
|
Genbank Accession
|
|
| Genbank Release Date |
|
| Genome Publication |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Marine cyanobacterial communities from the University of California, Santa Cruz, USA, analyzing cyanobacterial DNA methylation |
| Source Analysis Project |
Marine cyanobacteria communities from the University of California, Santa Cruz, USA, analyzing cyanobacterial DNA methylation - Crocosphaera watsoni WH8501 Co-Culture |
| JGI INFORMATION | |
|
JGI Data Utilization Status
|
Unrestricted |
|
ITS Analysis Project ID
|
1060213 (Portal) |
|
ITS Analysis Project Name
|
Crocosphaera watsonii WH 8501 (MAG) |
|
ITS Analysis Product Name
|
Microbial Metagenome-Assembled Genome |
| ITS Version Number |
1 |
|
JGI Award DOI
|
10.46936/10.25585/60000594 |
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