Studies
|
56,012 |
|
Biosamples
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183,990 |
|
Sequencing Projects
|
508,091 |
|
Analysis Projects
|
381,521 |
| Organisms | 480,532 |
| ANALYSIS PROJECT INFORMATION | |||||
|---|---|---|---|---|---|
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GOLD Analysis Project ID
|
Ga0063340 |
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| Analysis Project Name |
Desulfosporosinus sp. Tol-M |
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Analysis Project Name Suffix
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Analysis Project Type
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Metagenome-Assembled Genome |
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|
IMG Submission ID
|
64962 | ||||
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NCBI BioProject Accession
|
PRJNA258301 |
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|
NCBI BioSample Accession
|
SAMN02991555 |
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| Completion Status |
Complete |
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|
IMG Completion Date
|
2015-06-15 |
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| PI | Julia Foght | ||||
|
Analysis Project Description
|
Draft genome of Desulfosporosinus sp. Tol-M obtained by stable isotope probing of toluene- degrading methanogenic culture enriched from oil sands tailing of Alberta, Canada. |
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| Visibility | Public | ||||
| ANALYSIS PROJECT METADATA | |||||
| GOLD Organism Name |
Desulfosporosinus sp. Tol-M |
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|
NCBI Taxonomy ID
|
1536651 |
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| Phylum | FIRMICUTES | ||||
| Phylogeny Suggestion |
|
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|
Genus
|
Desulfosporosinus |
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| Species |
Desulfosporosinus sp. Tol-M |
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| Strain |
Tol-M |
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| Domain |
BACTERIAL |
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| NCBI Superkingdom |
Bacteria |
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| NCBI Kingdom |
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Number of tRNAs
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|
tRNA Software
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|
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Completeness Strategy
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|
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|
Scaffold Count
|
206 |
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Contig Count
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206 |
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Binning Method
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Binning Parameters
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Reassembly Attempted
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|
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MAG Coverage Software
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|
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|
Gene Calling Method
(MIGS-32)
|
Best-placed reference protein set;GeneMarkS+ |
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| Gene Count |
3036 |
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| Estimated Size |
3035900 |
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|
Sequencing Depth
(MIGS-31.1)
|
10.0x |
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| Contamination Percentage |
|
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| Completeness Percentage |
|
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| Genbank Anomalous Assembly |
No |
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| Genbank Anomalous Reason |
|
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| Annotation Pipeline |
|
||||
| Added By | Nikos Kyrpides on 2015-01-07 | ||||
| Last Modified By | JGI automated process on 2017-07-07 | ||||
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ORF Comparison Tools
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16S Recovered
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16S Recovery Software
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| PROJECT EXTERNAL REFERENCES | |||||
|
IMG Taxon ID
|
2619619281 |
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|
Genbank Accession
|
|
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| Genbank Release Date |
2015-01-28 |
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| Genome Publication |
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