ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0025687
Analysis Project Name Prefix EM3 bacterium JGI 0000106-B10
Analysis Project Name Suffix (unscreened)
Analysis Project Type Single Cell Analysis (unscreened)
IMG Submission ID 9861
Completion Status Complete
IMG Completion Date 2012-07-27
PI Tanja Woyke
Analysis Project Description
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) ALLPATHS v. R37654
IMG Decontamination Yes
IMG Decontamination Method Manual
Number of tRNAs
tRNA Software
Completeness Strategy
Scaffold Count 62
Contig Count
Gene Calling Method (MIGS-32) Prodigal 2.5
Gene Count 1222
Estimated Size 1313942
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Tanja Woyke on 2012-03-02
Last Modified By Supratim Mukherjee on 2017-03-01
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2264867131
IMG Metagenome bin count
IMG Predicted viruses
Genbank Accession
Genbank ID ASNC00000000 (GCA_000404705.1)
Release Date 2013-12-12
NCBI Genbank Version ASNC01
Genbank Release Date 2013-12-12
ANALYSIS PROJECT COMPOSITION
Study GEBA-MDM
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 1

 

 

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