ANALYSIS PROJECT INFORMATION | |||||||
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GOLD Analysis Project ID
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Ga0025687 |
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Analysis Project Name |
EM3 bacterium JGI 0000106-B10 (unscreened) |
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Analysis Project Name Stem |
EM3 bacterium JGI 0000106-B10 |
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Analysis Project Name Suffix
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(unscreened) |
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Analysis Project Type
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Single Cell Analysis (unscreened) |
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IMG Submission ID
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9861 | ||||||
Completion Status |
Complete |
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IMG Completion Date
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2012-07-27 |
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PI | Tanja Woyke | ||||||
Analysis Project Description
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Contamination Screening Method
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|
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Visibility | Public | ||||||
ANALYSIS PROJECT METADATA | |||||||
Assembly Method
(MIGS-30)
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ALLPATHS v. R37654 |
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IMG Decontamination
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Yes |
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IMG Decontamination Method
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Manual |
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Number of tRNAs
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|
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tRNA Software
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Completeness Strategy
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Scaffold Count
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62 |
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Contig Count
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|
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Gene Calling Method
(MIGS-32)
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Prodigal 2.5 |
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Gene Count |
1222 |
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Estimated Size |
1313942 |
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Sequencing Depth
(MIGS-31.1)
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|
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Genbank Anomalous Assembly |
No |
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Genbank Anomalous Reason |
|
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Annotation Pipeline |
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Added By | Tanja Woyke on 2012-03-02 | ||||||
Last Modified By | Supratim Mukherjee on 2017-03-01 | ||||||
ORF Comparison Tools
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16S Recovered
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|
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16S Recovery Software
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PROJECT EXTERNAL REFERENCES | |||||||
IMG Taxon ID
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2264867131 |
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Genbank Accession
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|
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Genbank Release Date |
2013-12-12 |
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ANALYSIS PROJECT COMPOSITION | |||||||
Study |
GEBA-MDM |
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Number of Studies
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1 |
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Number of Projects
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1 |
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Number of Related Analysis Projects
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1 |
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