ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0001214
Analysis Project Name Prefix Cytophagaceae bacterium JGI 0001001-B3
Analysis Project Name Suffix
Analysis Project Type Single Cell Analysis (unscreened)
IMG Submission ID 15984
Completion Status Complete
IMG Completion Date 2013-07-29
PI Susannah Tringe
Description
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 173
Contig Count 173
Gene Calling Method (MIGS-32) Prodigal 2.5
Gene Count 2039
Estimated Size 2089376
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Susannah Tringe on 2012-09-25
Last Modified By JGI automated process on 2017-06-04
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2528768072
IMG RNA-Seq ID
Genbank
Genbank ID AUOS00000000 (GCA_000464335)
Release Date 2014-06-24
NCBI Genbank Version AUOS02
Assembly Accession GCA_000464335
Genbank Release Date 2014-06-24
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Rhizosphere Grand Challenge Single Cell Sequencing
Number of Studies 1
Number of Biosamples 0
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1007633 (Portal)
ITS Analysis Project Name Cytophagaceae bacterium JGI 0001001-B3 Unscreened
ITS Analysis Product Name Microbial Minimal Draft Single Cell Unscreened Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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